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Molecular Genetics and Microbiology

Faculty

Molecular biology has revolutionized the fields of genetics and microbiology. The Department of Molecular Genetics offers Specialist and Major programs in Molecular Genetics and Microbiology, which emphasize the molecular aspects of both disciplines. Genetics, the science of heredity, and microbiology, the study of microorganisms (microbes), have long served as meeting grounds for a variety of biological disciplines. Developments in genetics and microbiology have contributed greatly to our basic understanding of the fundamental processes of life as well as to the treatment of genetic and infectious diseases.

Of particular significance in molecular genetics has been the development of techniques that permit the isolation, through cloning, of the genes responsible for specific traits, and the detailed analysis of their regulation, interactions, and products. More recently the advent of genome sequencing has fueled efforts to understand in full the information content of the genome and to assign function to every gene, using methods that allow systematic, genome-scale analyses of gene expression, the phenotypic consequences of gene disruption, and the interactions between genes and gene products. Molecular techniques have increased our ability to diagnose and understand viral and bacterial disease, and the complex microbe/host interactions that are involved. The impact of these and other technological advances extend to such diverse fields as plant and animal developmental biology, virology, immunology, cancer biology, and biotechnology. Studies at a molecular level are essential to understanding the consequences to life when fundamental processes are altered by mutation, by infection, or by the environment.

The Molecular Genetics and Microbiology Specialist program is a research-intensive program and is designed to provide strong in-depth training in science, including critical analyses of scientific concepts and literature, advanced laboratory experience, and detailed understanding and application of molecular biology. Specialists enter the program in 2nd year and then choose one of two Streams, called Genetics and Microbiology, by the start of the third year. Each Stream provides focused training, but there is considerable overlap between the streams, reflective of both the cross-disciplinary requirements of these two rapidly evolving disciplines and the impact of each on areas spanning modern biomedical science.

The Molecular Genetics and Microbiology Major program offers students fundamental training in molecular genetics and microbiology. Students tailor their own program and may focus on a microbiology major, a genetic major, or a combination; they choose a path to suit their specific interests. Students take several advanced courses in these disciplines, but the Major allows them to choose the breadth of their training by combining the MGY Major with another Major of interest.

The Department of Molecular Genetics is also a cosponsor of the Major program in Genome Biology, with the Departments of Cell and Systems Biology (CSB), and Ecology and Evolutionary Biology (EEB). See the Biology program listings for details of the Genome Biology Major.

Career opportunities for graduates include employment in research institutes, universities and other educational institutions, and industry. The programs provide excellent preparation for post-graduate research and professional programs.

Undergraduate Coordinator: Dr. B. Funnell, Medical Sciences Building (416-978-1665; email: mgy.info@utoronto.ca)

Undergraduate Office/General Inquiries: Medical Sciences Building Rm 4396 (416-978-8359; email: undergrad.molgen@utoronto.ca)

More information is available on our website: http://www.moleculargenetics.utoronto.ca/

Molecular Genetics and Microbiology Programs

This is a limited enrolment subject POSt that can only accommodate a limited number of students.  Eligibility will be competitive and based on a student’s marks in the 3.0 required first-year courses:

BIO120H1, BIO130H1, (CHM138H1, CHM139H1)/CHM151Y1, and 1.0 FCE from (MAT135H1, MAT136H1)/MAT135Y1/MAT137Y1/MAT157Y1/(PHY131H1, PHY132H1)/(PHY151H1, PHY152H1) with an average of at least 70% on these 3.0 full-course equivalents (FCEs) and a final mark of at least 60% in each course.

While it is difficult to predict what will be competitive course marks and average in a given year,  based on previous years, the estimate is: course marks =  high 70s; average = low 80s.

Achieving these estimated marks does not guarantee admission to the subject POSt in any given year.

Note:  Students must apply to this program on the Arts & Science Faculty Registrar’s Office website (see the Registration Handbook & Timetable for instructions).

At later times, contact the Undergraduate Coordinator.

(14 full courses or their equivalent)

First Year:
BIO120H1, BIO130H1; (CHM138H1, CHM139H1)/CHM151Y1; /(MAT135H1, MAT136H1)/MAT135Y1/ MAT137Y1; (PHY131H1, PHY132H1)/(PHY151H1, PHY152H1)

Note that biology, chemistry and math should be taken in 1st year; Physics may be taken in later years.

Second Year:
BCH242Y1; BIO230H1, BIO260H1; CHM220H1, CHM247H1, BIO220H1/STA220H1

Third Year:

Genetics Stream:
1. BCH340H1, BCH371H1; MGY311Y1, MGY312H1
2. One (0.5 full-course equivalent) from CHM347H1, MGY350H1, MGY377H1, MGY378H1

Microbiology Stream
1. IMM335Y1; MGY311Y1, MGY376H1, MGY377H1, MGY378H1

Fourth Year:

Genetics Stream:
1. MGY420H1, MGY432H1
plus 2.5 credits from Genetics Lists 1 and 2, distributed as follows:
2. At least 1.5 full-course equivalents must be taken from list 1:CSB460H1, MGY425H1, MGY428H1, MGY451H1, MGY452H1, MGY470H1
3. Up to 1.0 full-course equivalent may be taken from list 2:
BCH422H1, BCH440H1, BCH441H1; BCH448H1,CSB472H1; MGY434H1, MGY440H1, MGY445H1, MGY480Y1

Microbiology Stream:
1. MGY432H1 plus 2.5 credits from Microbiology Lists 1 and 2, distributed as follows:
2. At least 1.5 full-course equivalents must be taken from list 1:LMP436H1; MGY420H1, MGY428H1, MGY434H1, MGY440H1, MGY445H1; MIJ485H1
3. Up to 1.0 full-course equivalent may be taken from list 2:
BCH340H1, BCH422H1, BCH426H1, BCH441H1, BCH445H1; BCH446H1; BCH448H1,CSB452H1, CSB460H1; IMM430H1; JBI428H1; LMP403H1; MGY350H1, MGY425H1, MGY451H1, MGY452H1, MGY470H1, MGY480Y1

This is a limited enrolment subject POSt that can only accommodate a limited number of students.  Eligibility will be competitive and based on a student’s marks in the 3.0 required first-year courses:

BIO120H1, BIO130H1, (CHM138H1, CHM139H1)/CHM151Y1, and 1.0 FCE from (MAT135H1, MAT136H1)/MAT135Y1/MAT137Y1/MAT157Y1/(PHY131H1, PHY132H1)/(PHY151H1, PHY152H1) with an average of at least 70% on these 3.0 full-course equivalents (FCEs) and a final mark of at least 60% in each course.

While it is difficult to predict what will be competitive course marks and average in a given year,  based on previous years, the estimate is: course marks =  mid 70s; average = mid 70s.

Achieving these estimated marks does not guarantee admission to the subject POSt in any given year.

Note:  Students must apply to this program on the Arts & Science Faculty Registrar’s Office website (see the Registration Handbook & Timetable for instructions).

At later times, contact the Undergraduate Coordinator.

(8 full courses or their equivalent)

First Year:
BIO120H1, BIO130H1; (CHM138H1, CHM139H1)/CHM151Y1; (MAT135H1, MAT136H1)/MAT135Y1/ MAT137Y1
Second Year:
BCH210H1; BIO230H1, BIO260H1/HMB265H1, MGY200H1
Third Year:
BCH311H1/CSB349H1; MGY312H1/MGY376H1 plus 1.0 full-course equivalent from MGY350H1; MGY377H1; MGY378H1
Fourth Year:
1.0 full-course equivalent from the following list: MGY425H1, MGY428H1, MGY434H1, MGY440H1, MGY445H1, MGY451H1, MGY452H1, MGY470H1, MIJ485H1

Molecular Genetics and Microbiology Courses

The 199Y1 and 199H1 seminars are designed to provide the opportunity to work closely with an instructor in a class of no more than twenty-four students. These interactive seminars are intended to stimulate the students’ curiosity and provide an opportunity to get to know a member of the professorial staff in a seminar environment during the first year of study. Details here.

Introduction to the modern era of genetics and microbiology, and its impact on human health.  Topical biological problems and cutting-edge scientific approaches with examples from world-class Toronto labs.  Topics include: combating HIV; emerging and recurring microbial threats; repairing spinal cord injury; cancer biology; power of stem cells; fountain of youth.

Credit course for supervised participation in faculty research project. Details here.

DNA replication, DNA repair and mutation, recombination, transcription, RNA modification and processing, the genetic code and tRNA, translation, regulation of gene expression, development and differentiation, molecular evolution.

Laboratory experiments in genetics of model organisms. Topics studied include Mendelian genetics, linkage and recombination, complementation, analysis of chromosome rearrangements, mutant selection and analysis, and genetic crosses in bacteria, yeast, and fruit flies.

The course examines concepts of genetics in the context of human development, disease and evolution. Topics include genetic interactions and complex traits, variation in disease phenotype, signalling and development, stem cells and epigenetic regulation.

Fundamental laboratory techniques in bacteriology, bacterial genetics and virology, including immunologically-based assays. Topics may include biofilms, molecular-based identification of bacteria and expression of reporter genes from viral vectors. Valuable not only for students in Microbiology but also for those in related disciplines which make use of bacteria and viruses as research tools. Open to students in related programs.

Detailed study of bacteria in terms of structure, classification and replication. Basis for advanced study in various aspects of bacteriology including bacterial physiology, bacterial genetics, molecular pathogenesis of disease and environmental studies.

Detailed study of viruses in terms of structure, classification, replication and interaction with the host. Basis for advanced study in virology. Requires some familiarity with immunology. A concurrent course in immunology (IMM334Y1/335Y1) is recommended.

Regulatory mechanisms controlling gene expression in eukaryotes; students will read, discuss, and present the primary research literature in class. Topics include: assembly of the initiation complex; roles of transcription factors, co-activators and cis-acting regulatory elements; promoter escape; mechanisms that control elongation, termination and anti-termination of transcription; chromatin control of transcription.

This course presents and integrates molecular aspects of signal transduction and cell cycle regulation in eukaryotic cells from yeast to humans. Emphasis is on recent advances in growth factor receptor signalling, modular protein domains, and the recurrent role of protein phosphorylation and protein-protein interactions in cell regulation.

A broad ranging course that covers many aspects of genomics, which is the discipline of defining and attributing function to all of the heritable material of an organism on a genome-wide scale, as applied to microbes, invertebrates and vertebrates. The primary and review literature will be the basis of all lectures.

Laboratory experiments demonstrating basic and advanced molecular biological methods applied to molecular genetics and microbiology.

How bacteria sense their environment and signal to regulatory systems when to adapt to environmental stimuli. Topics discussed include the bacterial cell cycle, carbon/energy metabolism, catabolite repression, bacterial development, sporulation, stress responses, regulatory two-component systems and quorum sensing.

Analysis of virus/host interactions at the molecular level with a view to understanding how viruses cause disease. Course material is based on recent research publications. Topics may include: virus entry and intracellular trafficking, activation of host cell signalling pathways, viral and host determinants of tissue tropism within the host and transmission between hosts.

Current approaches to gene therapy including design of virus-based vectors for delivery and expression of effector genes. Emphasis on the use of retrovirus-based strategies for prevention and treatment of HIV infection.

Basic and advanced principles of genetic analysis applied to the study of two of the best-understood eukaryotic model organisms: the yeast Saccharomyces cerevisiae and the nematode worm Caenorhabditis elegans. We emphasize the use of genetic approaches to address problems in cell biology and development, such as the regulation of cell fate. Much of the knowledge gained from these simple organisms has proven broadly applicable, and the same principles of developmental genetic analysis underlie efforts to understand the development of more complex organisms.

This companion course to MGY451H1 moves on to cover the more complex animal models of development and disease - the fruit fly, zebrafish and mouse. Advanced genetic principles and approaches used in the study of these animals are introduced, and applied to highly conserved genetic and molecular processes that give rise to common structures such as the limbs, nervous system and eyes. Students completing this course should be able to understand and evaluate any study that makes use of these three major model systems.

Current aspects of human and molecular genetics including: chromosome structure and function, inheritance of mutations and disease, the human genome and disease gene mapping, cancer genetics, mouse disease models and gene based diagnostics and therapies.

An opportunity for specialized individual research in molecular genetics and microbiology by arrangement with the course coordinator.

Analysis of the strategies used by pathogenic microbes to evade specific and innate immune responses, and the strategies used to combat infectious disease using vaccines, with an emphasis on molecular and immunological aspects. Special topics include: molecular basis of pathogenicity and immune-evasion strategies; vaccination strategies; challenges to vaccine implementation (given jointly by the Departments of Molecular Genetics and Immunology).